Self

MetaMod 2016

Metabolic Modelling Workshop, NCL, Pune

14-16 March 2016

metamod.png

The two options for installing ScrumPy on your computer are to directly install the package on a suitable Linux operating system, or to run a virtual machine under other operating system. Instructions are here.

Timetable (Subject to Change)

Mornings, 9:30 -12:30 (Monday 11:00 - 12:30); Lunch 12:30 - 14:00; Afternoons, 14:00 - 17:00 (at the latest)

Day

Time

Activity

Resources

Who

Mon 14th, AM

11:00

Registration and admin

11:20

Welcome Talk

Anu + Mark

11:30

Talk: Introductory theory

Slides

Mark

12:30

Lunch

All

Mon 14th, PM

14:00

Talk: Python, object-orientation and models.

Slides

Mark

15:00

Practical 0: Checking ScrumPy installation and familiarisation

Instructions

All

17:00

Close

Tue 15th, AM

09:30

Talk: Structural analysis of small models.

Slides

David

10:30

Practical 1: Structural analysis of small models

Instructions

All

12:30

Lunch

Tue 15th, PM

14:00

Talk: Algorithms for calculating Elementary Modes

Slides

Hassan

15:00

Talk: Linear Programming and Genome Scale Models

Slides

Mark

16:00

Practical 1: (continued)

Instructions

All

17:00

Close

Wed 16th, AM

09:30

Talk: Biotechnological Applications of Metabolic Network Analysis

Slides

David

10:30

Talk: Analysis of GSMs - Novel antibiotic targets

Slides

Hassan

11:30

Practical 2: Identifying Novel Antibiotic Targets in Salmonella

Instructions

12:30

Lunch

Wed 16th, PM

14:00

Practical 2: (continued)

Instructions

15:30

Talk: Metabolic engineering of Geobacillus

Slides

Hassan

16:30

Concluding remarks and presentation of certificates

17:00

Close

None: Meetings/Pune2016 (last edited 2016-03-16 05:20:26 by mark)