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 '''The timetable is currently a draft and subject to change, although the topics will stay substantially the same. '''

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||<style="font-size:10pt;text-align:center;vertical-align:bottom;">'''1''' ||<style="font-size:10pt;text-align:center;">[[http://mudsharkstatic.brookes.ac.uk/AccliPhot/Workshop2/Slides/RecapStrM/Slides.pdf|Recap of Structural Modelling (MP)]] ||<style="font-size:10pt;text-align:center;">Theory of Kinetic Modelling (OE) ||<style="font-size:10pt;text-align:center;">Theory of Metabolic Control Analysis (OE) ||<style="font-size:10pt;text-align:center;">A Kinetic Model of the Calvin Cycle (MP) ||||<style="font-size:10pt;text-align:center;">To be confirmed (A.N. Other) || ||<style="font-size:10pt;text-align:center;vertical-align:bottom;">'''1''' ||<style="font-size:10pt;text-align:center;">[[http://mudsharkstatic.brookes.ac.uk/AccliPhot/Workshop2/Slides/RecapStrM/Slides.pdf|Recap of Structural Modelling (MP)]] ||<style="font-size:10pt;text-align:center;">[[http://mudsharkstatic.brookes.ac.uk/AccliPhot/Workshop2/Slides/kinetics.pdf|Theory of Kinetic Modelling (OE)]] ||<style="font-size:10pt;text-align:center;">[[http://mudsharkstatic.brookes.ac.uk/AccliPhot/Workshop2/Slides/mca/Slides.pdf|Theory of Metabolic Control Analysis (OE)]] ||<style="font-size:10pt;text-align:center;">[[http://mudsharkstatic.brookes.ac.uk/AccliPhot/Workshop2/Slides/Calvin/Slides.pdf|A Kinetic Model of the Calvin Cycle]](MP) ||||<style="font-size:10pt;text-align:center;">To be confirmed (A.N. Other) ||
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||<style="font-size:10pt;text-align:center;vertical-align:bottom;">'''3''' ||<style="font-size:10pt;text-align:center;">Recap and update of the ScrumPy software ||<style="font-size:10pt;text-align:center;">[[AccliPhot/WorkshopTwo/Tue_3|Construction and Analysis of Kinetic Models With ScrumPy]] ||<style="font-size:10pt;text-align:center;">Kinetic Modelling Practical 2 Metabolic Control Analysis ||<style="font-size:10pt;text-align:center;">Kinetic Modelling Practical 3 Modelling the Calvin Cycle ||||||<style="font-size:10pt;text-align:center;">[[AccliPhot/WorkShopTwo/AOB|Any Other Business]] ||
||<style="font-size:10pt;text-align:center;vertical-align:bottom;">'''4''' ||<style="font-size:10pt;text-align:center;">[[AccliPhot/WorkshopTwo/Moin|Moin software for the Accliphot wiki]] ||<style="font-size:10pt;text-align:center;">[[Accliphot/WorkshopTwo//Practical_1|Kinetic Modelling Practical 1]] ||<style="font-size:10pt;text-align:center;">[[AccliPhot/WorkshopTwo/Practical_2|Kinetic Modelling Practical 2]]Metabolic Control Analysis ||<style="font-size:10pt;text-align:center;">Kinetic Modelling Practical 3 Modelling the Calvin Cycle ||||||<style="font-size:10pt;text-align:center;">[[AccliPhot/WorkshopTwo/GeneralDisc|Group Discussion]] ||
||<style="font-size:10pt;text-align:center;vertical-align:bottom;">'''3''' ||<style="font-size:10pt;text-align:center;">[[http://mudsharkstatic.brookes.ac.uk/AccliPhot/Workshop2/Slides/RecapScrumPy/Slides.pdf|Recap of Python and ScrumPy]] ||<style="font-size:10pt;text-align:center;">[[http://mudsharkstatic.brookes.ac.uk/AccliPhot/Workshop2/Slides/ScrumPyKin/Slides.pdf|Construction and Analysis of Kinetic Models With ScrumPy]] ||<style="font-size:10pt;text-align:center;">Kinetic Modelling Practical 2 Metabolic Control Analysis ||<style="font-size:10pt;text-align:center;">[[AccliPhot/WorkshopTwo/Practical_3|Kinetic Modelling Practical 3 Modelling the Calvin Cycle]] ||||||<style="font-size:10pt;text-align:center;">[[AccliPhot/WorkshopTwo/GeneralDisc|Group Discussion]] ||
||<style="font-size:10pt;text-align:center;vertical-align:bottom;">'''4''' ||<style="font-size:10pt;text-align:center;">[[AccliPhot/WorkshopTwo/Moin|Moin software for the Accliphot wiki]] ||<style="font-size:10pt;text-align:center;">[[Accliphot/WorkshopTwo//Practical_1|Kinetic Modelling Practical 1]] ||<style="font-size:10pt;text-align:center;">[[AccliPhot/WorkshopTwo/Practical_2|Kinetic Modelling Practical 2]] Metabolic Control Analysis ||<style="font-size:10pt;text-align:center;">Kinetic Modelling Practical 3 Modelling the Calvin Cycle ||||||<style="font-size:10pt;text-align:center;">[[AccliPhot/WorkShopTwo/AOB|Any Other Business]] ||

Notes

  1. Please revise the material fromworkshop 1 before arriving, and bring your laptop with ScrumPy installed.

  2. Material for the sessions will appear as links in the timetable, feel free to browse them as they become available, but be aware that some details may change.
  3. The workshop will run from 0900-1700, timings of individual sessions are likely to vary.

Session

Mon

Tue

Wed

Thur

Fri

1

Recap of Structural Modelling (MP)

Theory of Kinetic Modelling (OE)

Theory of Metabolic Control Analysis (OE)

A Kinetic Model of the Calvin Cycle(MP)

To be confirmed (A.N. Other)

2

Modelling Phaeodactylum (Dipali)

Modelling Arabidopsis and Chlamydomonas (Kailash)

Modelling the Light Reactions (Anna)

Modelling Bioreactors (Brieuc)

Modelling Chloroplast Signalling (Antonella)

Lunch

3

Recap of Python and ScrumPy

Construction and Analysis of Kinetic Models With ScrumPy

Kinetic Modelling Practical 2 Metabolic Control Analysis

Kinetic Modelling Practical 3 Modelling the Calvin Cycle

Group Discussion

4

Moin software for the Accliphot wiki

Kinetic Modelling Practical 1

Kinetic Modelling Practical 2 Metabolic Control Analysis

Kinetic Modelling Practical 3 Modelling the Calvin Cycle

Any Other Business

None: AccliPhot/WorkshopTwo (last edited 2014-09-16 09:54:19 by mark)