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Size: 1833
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← Revision 5 as of 2012-10-12 12:04:15 ⇥
Size: 1403
Comment:
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| Deletions are marked like this. | Additions are marked like this. |
| Line 4: | Line 4: |
| ################ ### fixation ### ################ |
# Calvin cycle + OPPP |
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| ## EC 4.1.2.39 x_CO2 + RuBP -> 2 PGA ~ |
x_CO2 + RuBP_ch -> 2 PGA_ch ~ |
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| ################# ### reduction ### ################# |
PGK: PGA_ch + ATP_ch <> BPGA_ch + ADP_ch ~ |
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| PGK: ## EC 2.7.2.3 PGA + ATP <> BPGA + ADP ~ |
G3Pdh: BPGA_ch + x_NADPH_ch + x_Proton_ch <> x_NADP_ch + GAP_ch + Pi_ch ~ |
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| GAPDH: ## EC 1.2.1.13 BPGA + x_NADPH + x_Proton <> x_NADP + GAP + Pi ~ |
|
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| ## EC 5.3.1.1 GAP <> DHAP ~ |
GAP_ch <> DHAP_ch ~ |
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| #################### ### regeneration ### #################### |
Aldo: DHAP_ch + GAP_ch <> FBP_ch ~ FBPase: FBP_ch -> F6P_ch + Pi_ch ~ |
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| Ald1: ## EC 4.1.2.13 DHAP + GAP <> FBP ~ |
TKL: F6P_ch + GAP_ch <> E4P_ch + X5P_ch ~ |
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| FBPase: ## EC 3.1.3.11 FBP -> F6P + Pi ~ |
|
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| TKL1: ## EC 2.2.1.1 F6P + GAP <> E4P + X5P ~ |
Aldo2: E4P_ch + DHAP_ch <> SBP_ch ~ |
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| Ald2: ## EC 4.1.2.13 E4P + DHAP <> SBP ~ |
TAL: E4P_ch + F6P_ch <> S7P_ch + GAP_ch ~ SBPase: SBP_ch -> S7P_ch + Pi_ch ~ |
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| SBPase: ## EC 3.1.3.37 SBP -> S7P + Pi ~ |
|
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| ## EC 2.2.1.1 GAP + S7P <> X5P + R5P ~ |
GAP_ch + S7P_ch <> X5P_ch + R5P_ch ~ |
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| ## EC 5.3.1.6 R5P <> Ru5P ~ |
R5P_ch <> Ru5P_ch ~ |
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| X5Piso: ## EC 5.1.3.1 X5P <> Ru5P ~ |
X5Pepi: X5P_ch <> Ru5P_ch ~ Ru5Pk: Ru5P_ch + ATP_ch -> RuBP_ch + ADP_ch ~ |
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| Ru5Pk: ## EC 2.7.1.19 Ru5P + ATP -> RuBP + ADP ~ |
|
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| ##################### ### starch branch ### ##################### |
#TP/Pi antiport 1 PGA TP_Pi_apPGA: PGA_ch + x_Pi_cyt -> Pi_ch + x_PGA_cyt ~ |
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| TP_Pi_apGAP: GAP_ch + x_Pi_cyt -> Pi_ch + x_GAP_cyt ~ TP_Pi_apDHAP: DHAP_ch + x_Pi_cyt -> Pi_ch + x_DHAP_cyt ~ |
|
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| ## EC 5.3.1.9 F6P <> G6P ~ |
F6P_ch <> G6P_ch ~ |
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| ## EC 5.4.2.2 G6P <> G1P ~ |
G6P_ch <> G1P_ch ~ |
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| StSynth: ## AGPase (EC 2.7.7.27) merged with StSynth (EC 2.4.1.21) G1P + ATP -> x_Starch + ADP + 2 Pi ~ |
StSynth: G1P_ch + ATP_ch -> ADP_ch + 2 Pi_ch + x_Starch_ch ~ |
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| StPase: ## EC 2.4.1.1 x_Starch + Pi <> G1P ~ |
StPase: x_Starch_ch + Pi_ch -> G1P_ch ~ |
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| ############################################# ### transport across chloroplast membrane ### ############################################# |
OPPpath: G6P_ch +2 x_NADP_ch -> 2 x_NADPH_ch +2 x_Proton_ch + Ru5P_ch + x_CO2 ~ |
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| TPT_PGA: PGA + x_Pi -> Pi + x_PGA ~ TPT_GAP: GAP + x_Pi -> Pi + x_GAP ~ TPT_DHAP: DHAP + x_Pi -> Pi + x_DHAP ~ ####################### ### light reactions ### ####################### LReac: ADP + Pi -> ATP ~ ########################################### ### Oxidative Pentose Phosphate Pathway ### ########################################### Oxid: G6P + 2 x_NADP -> 2 x_NADPH + R5P + x_CO2 ~ TAL: E4P + F6P <> S7P + GAP ~ |
Light_react: ADP_ch + Pi_ch -> ATP_ch ~ |
1 Structural()
2
3 # Calvin cycle + OPPP
4
5 Rubisco:
6 x_CO2 + RuBP_ch -> 2 PGA_ch
7 ~
8
9 PGK:
10 PGA_ch + ATP_ch <> BPGA_ch + ADP_ch
11 ~
12
13 G3Pdh:
14 BPGA_ch + x_NADPH_ch + x_Proton_ch <> x_NADP_ch + GAP_ch + Pi_ch
15 ~
16
17
18 TPI:
19 GAP_ch <> DHAP_ch
20 ~
21
22 Aldo:
23 DHAP_ch + GAP_ch <> FBP_ch
24 ~
25 FBPase:
26 FBP_ch -> F6P_ch + Pi_ch
27 ~
28
29 TKL:
30 F6P_ch + GAP_ch <> E4P_ch + X5P_ch
31 ~
32
33
34 Aldo2:
35 E4P_ch + DHAP_ch <> SBP_ch
36 ~
37
38 TAL:
39 E4P_ch + F6P_ch <> S7P_ch + GAP_ch
40 ~
41
42 SBPase:
43 SBP_ch -> S7P_ch + Pi_ch
44 ~
45
46
47 TKL2:
48 GAP_ch + S7P_ch <> X5P_ch + R5P_ch
49 ~
50
51
52
53
54 R5Piso:
55 R5P_ch <> Ru5P_ch
56 ~
57
58 X5Pepi:
59 X5P_ch <> Ru5P_ch
60 ~
61 Ru5Pk:
62 Ru5P_ch + ATP_ch -> RuBP_ch + ADP_ch
63 ~
64
65
66 #TP/Pi antiport 1 PGA
67
68 TP_Pi_apPGA:
69 PGA_ch + x_Pi_cyt -> Pi_ch + x_PGA_cyt
70 ~
71
72
73 TP_Pi_apGAP:
74 GAP_ch + x_Pi_cyt -> Pi_ch + x_GAP_cyt
75 ~
76
77
78 TP_Pi_apDHAP:
79 DHAP_ch + x_Pi_cyt -> Pi_ch + x_DHAP_cyt
80 ~
81
82 PGI:
83 F6P_ch <> G6P_ch
84 ~
85
86 PGM:
87 G6P_ch <> G1P_ch
88 ~
89
90 StSynth:
91 G1P_ch + ATP_ch -> ADP_ch + 2 Pi_ch + x_Starch_ch
92 ~
93
94
95 StPase:
96 x_Starch_ch + Pi_ch -> G1P_ch
97 ~
98
99 OPPpath:
100 G6P_ch +2 x_NADP_ch -> 2 x_NADPH_ch +2 x_Proton_ch + Ru5P_ch + x_CO2
101 ~
102
103
104 Light_react:
105 ADP_ch + Pi_ch -> ATP_ch
106 ~