1 Structural()
   2 
   3 # Calvin cycle + OPPP
   4 
   5 Rubisco:
   6         x_CO2 + RuBP_ch -> 2 PGA_ch           
   7         ~ # light only
   8 
   9 PGK: 
  10         PGA_ch + ATP_ch <> BPGA_ch + ADP_ch          
  11         ~ # light only
  12 
  13 G3Pdh:
  14         BPGA_ch + x_NADPH_ch + x_Proton_ch <> x_NADP_ch + GAP_ch + Pi_ch 
  15         ~ # light only   
  16 
  17 
  18 TPI:
  19         GAP_ch <> DHAP_ch 
  20         ~
  21 
  22 Aldo:
  23         DHAP_ch + GAP_ch <>  FBP_ch  
  24         ~
  25 FBPase:
  26         FBP_ch -> F6P_ch + Pi_ch
  27          ~ # light only
  28 
  29 TKL:
  30         F6P_ch + GAP_ch <> E4P_ch + X5P_ch 
  31         ~
  32 
  33 
  34 Aldo2:
  35         E4P_ch + DHAP_ch <> SBP_ch  
  36         ~
  37 
  38 TAL:
  39         E4P_ch + F6P_ch <> S7P_ch + GAP_ch 
  40         ~ # dark only
  41         
  42 SBPase:
  43         SBP_ch -> S7P_ch + Pi_ch              
  44         ~ # light only
  45 
  46 
  47 TKL2:
  48         GAP_ch + S7P_ch <> X5P_ch + R5P_ch  
  49         ~
  50 
  51 
  52 
  53 
  54 R5Piso:
  55         R5P_ch <> Ru5P_ch 
  56         ~
  57 
  58 X5Pepi:
  59         X5P_ch <> Ru5P_ch 
  60         ~
  61 Ru5Pk:
  62         Ru5P_ch + ATP_ch -> RuBP_ch + ADP_ch            
  63         ~ # light only
  64 
  65 
  66 #TP/Pi antiport 1 PGA
  67         
  68 TP_Pi_apPGA:                  
  69         PGA_ch + x_Pi_cyt -> Pi_ch + x_PGA_cyt 
  70         ~
  71 
  72                                                 
  73 TP_Pi_apGAP:
  74         GAP_ch + x_Pi_cyt -> Pi_ch + x_GAP_cyt          
  75         ~
  76 
  77                                                 
  78 TP_Pi_apDHAP:
  79         DHAP_ch + x_Pi_cyt -> Pi_ch + x_DHAP_cyt        
  80         ~
  81                  
  82 PGI:
  83         F6P_ch <> G6P_ch 
  84         ~
  85 
  86 PGM:
  87         G6P_ch <> G1P_ch 
  88         ~
  89 
  90 StSynth:
  91         G1P_ch + ATP_ch -> ADP_ch + 2 Pi_ch + x_Starch_ch 
  92         ~
  93 
  94 
  95 Starch Pase
  96  
  97 StPase: 
  98         x_Starch_ch + Pi_ch -> G1P_ch 
  99         ~
 100 
 101 OPPpath:
 102         G6P_ch +2 x_NADP_ch -> 2 x_NADPH_ch  +2 x_Proton_ch +  Ru5P_ch + x_CO2 
 103         ~ #dark only
 104         
 105 # Light reactions  
 106 Light_react:            
 107         ADP_ch + Pi_ch -> ATP_ch 
 108         ~ # light only