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Modelling Workshop, Pune, 2016
Download the Virtualbox image and import it into virtual box (File/Import appliance). There is single user with the id 'scrumpy' with the password 'scrumpy'. 'scrumpy' is also the root password. This image is for pre-workshop testing and may well change!
Follow this link if you wish to install ScrumPy on a Linux computer.
Draft timetable
Mornings, 9:30 -12:30 (Monday 10:00 - 12:30); Lunch 12:30 - 14:00; Afternoons, 14:00 - 17:00 (at the latest)Slides
Time |
Activity |
Resources |
Who |
Mon 14th, AM |
Registration and admin |
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Mon 14th, PM |
Talk: Indroductory theory |
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Talk: Python, object-orientation and models. |
Mark |
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Practical 0: Checking ScrumPy installation |
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All |
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Tue 15th, AM |
Talk: Structural analysis of small models. |
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Practical 1: Structural analysis of small models |
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All |
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Tue 15th, PM |
Talk: Construction of Genome-scale models. |
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Talk: Intro LP/FBA |
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Practical 1: (continued) |
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All |
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Wed 16th, AM |
Case studies in biotechnology and metabolic engineering (link need updating!) |
David |
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Talk: Analysis of GSMs |
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Practical 2: |
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Wed 16th, PM |
Placeholder |
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