Differences between revisions 13 and 18 (spanning 5 versions)

Modelling Workshop, Pune, 2016

Download the Virtualbox image and import it into virtual box (File/Import appliance). There is single user with the id 'scrumpy' with the password 'scrumpy'. 'scrumpy' is also the root password. This image is for pre-workshop testing and may well change!

Follow this link if you wish to install ScrumPy on a Linux computer.

Draft timetable

Mornings, 9:30 -12:30 (Monday 10:00 - 12:30); Lunch 12:30 - 14:00; Afternoons, 14:00 - 17:00 (at the latest)

Time	Activity	Resources	Who
Mon 14th, AM	Registration and admin
Mon 14th, PM	Talk: Indroductory theory	Slides
	Talk: Python, object-orientation and models.	Slides	Mark
	Practical 0: Checking ScrumPy installation		All
Tue 15th, AM	Talk: Structural analysis of small models.	Slides
Tue 15th, AM	Practical 1: Structural analysis of small models		All
Tue 15th, PM	Talk: Construction of Genome-scale models.	Slides
	Talk: Intro LP/FBA
	Practical 1: (continued)		All
Wed 16th, AM	Case studies in biotechnology and metabolic engineering (link need updating!)	Slides
	Talk: Analysis of GSMs	Slides
	Practical 2:
Wed 16th, PM	Content
	Content	Slides
	Content

-  ⇤ ← Revision 13 as of 2016-03-03 17:00:53 → 
  Size: 2923
  Editor: mark
  Comment:
+   ← Revision 18 as of 2016-03-03 17:25:37 → ⇥
  Size: 3078
  Editor: mark
  Comment:
-Deletions are marked like this.
+Additions are marked like this.
 Line 7:
-Mornings, 9:30 -12:30 (Monday 10:00 - 12:30); Lunch 12:30 - 14:00; Afternoons, 14:00 - 17:00 (at the latest)[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L1/Slides.pdf|Slides]]
+Mornings, 9:30 -12:30 (Monday 10:00 - 12:30); Lunch 12:30 - 14:00; Afternoons, 14:00 - 17:00 (at the latest)
 Line 11:
-||'''Talk:''' Python, object-orientation and models. ||<style="text-align:left;" |1>[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L1/Slides.pdf|Slides]] ||<style="text-align:center" |1>Mark ||
+||'''Talk:''' Python, object-orientation and models. ||<style="text-align:left;" |1>[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L2/Slides.pdf|Slides]] ||<style="text-align:center" |1>Mark ||
 Line 13:
-||<style="text-align:center" |2>Tue 15th, AM ||'''Talk:''' Structural analysis of small models. ||[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L1/Slides.pdf|Slides]] ||<style="text-align:center" |1>                        ||
+||<style="text-align:center" |2>Tue 15th, AM ||'''Talk:''' Structural analysis of small models. ||[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L3/Slides.pdf|Slides]] ||<style="text-align:center" |1>                        ||
 Line 15:
-||<style="text-align:center" |3>Tue 15th, PM ||'''Talk:''' Construction of Genome-scale models. ||[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L1/Slides.pdf|Slides]] ||<style="text-align:center" |1>                        ||
+||<style="text-align:center" |3>Tue 15th, PM ||'''Talk:''' Construction of Genome-scale models. ||[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L4/Slides.pdf|Slides]] ||<style="text-align:center" |1>                        ||
 Line 18:
-||<style="text-align:center" |3>Wed 16th, AM ||[[http://mudsharkstatic.brookes.ac.uk/Delhi2013/Slides/wshop2_mca3.pdf|Case studies in biotechnology and metabolic engineering]] (link need updating!) ||[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L1/Slides.pdf|Slides]] ||<style="text-align:center" |1>David ||
||'''Talk:''' Analysis of GSMs ||[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L1/Slides.pdf|Slides]] ||                        ||
||                        '''Practical 2:'''||                        ||                        ||
||<|3>Wed 16th, PM||Placeholder||<|1> ||
||Placeholder||<|1> ||
||Placeholder||<|1> ||
+||<style="text-align:center" |3>Wed 16th, AM ||[[http://mudsharkstatic.brookes.ac.uk/Delhi2013/Slides/wshop2_mca3.pdf|Case studies in biotechnology and metabolic engineering]] (link need updating!) ||[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L5/Slides.pdf|Slides]] ||<style="text-align:center" |1>                        ||
||'''Talk:''' Analysis of GSMs ||[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L6/Slides.pdf|Slides]] ||                        ||
||'''Practical 2:''' ||                        ||                        ||
||<style="text-align:center" |3>Wed 16th, PM ||Content ||                        ||<style="text-align:center" |1>                        ||
||Content ||[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L7/Slides.pdf|Slides]] ||                        ||
||Content ||                        ||                        ||