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| ||<style="text-align:center" |3>Mon 14th, PM ||'''Talk:''' Indroductory theory ||[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L1/Slides.pdf|Slides]] ||<style="text-align:center" |1> || | ||<style="text-align:center" |3>Mon 14th, PM ||'''Talk:''' Indroductory theory ||[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L1/Slides.pdf|Slides]] ||<style="text-align:center" |1> Mark|| |
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| ||<style="text-align:center" |3>Tue 15th, PM ||'''Talk:''' Construction of Genome-scale models. ||[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L4/Slides.pdf|Slides]] ||<style="text-align:center" |1> || ||'''Talk:''' Intro LP/FBA ||<style="text-align:center" |1> ||<style="text-align:center" |1> || |
||<style="text-align:center" |3>Tue 15th, PM ||'''Talk:''' Construction of GSMs OR E.M. Algorithms ||[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L4/Slides.pdf|Slides]] ||<style="text-align:center" |1> Hassan|| ||'''Talk:''' Intro LP/FBA(Could include Construction of GSMs here) ||<style="text-align:center" |1>[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L5/Slides.pdf|Slides]] ||<style="text-align:center" |1> || |
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| ||<style="text-align:center" |3>Wed 16th, AM ||[[http://mudsharkstatic.brookes.ac.uk/Delhi2013/Slides/wshop2_mca3.pdf|Case studies in biotechnology and metabolic engineering]] (link need updating!) ||[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L5/Slides.pdf|Slides]] ||<style="text-align:center" |1> || ||'''Talk:''' Analysis of GSMs ||[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L6/Slides.pdf|Slides]] || || |
||<style="text-align:center" |3>Wed 16th, AM ||[[http://mudsharkstatic.brookes.ac.uk/Delhi2013/Slides/wshop2_mca3.pdf|Case studies in biotechnology and metabolic engineering]] (link needs updating!) ||[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L6/Slides.pdf|Slides]] ||<style="text-align:center" |1> || ||'''Talk:''' Analysis of GSMs ||[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L7/Slides.pdf|Slides]] || || |
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| ||Content ||[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L7/Slides.pdf|Slides]] || || | ||Content ||[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L8/Slides.pdf|Slides]] || || |
Modelling Workshop, Pune, 2016
Download the Virtualbox image and import it into virtual box (File/Import appliance). There is single user with the id 'scrumpy' with the password 'scrumpy'. 'scrumpy' is also the root password. This image is for pre-workshop testing and may well change!
Follow this link if you wish to install ScrumPy on a Linux computer.
Draft timetable
Mornings, 9:30 -12:30 (Monday 10:00 - 12:30); Lunch 12:30 - 14:00; Afternoons, 14:00 - 17:00 (at the latest)
Time |
Activity |
Resources |
Who |
Mon 14th, AM |
Registration and admin |
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|
Mon 14th, PM |
Talk: Indroductory theory |
Mark |
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Talk: Python, object-orientation and models. |
Mark |
||
Practical 0: Checking ScrumPy installation |
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All |
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Tue 15th, AM |
Talk: Structural analysis of small models. |
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Practical 1: Structural analysis of small models |
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All |
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Tue 15th, PM |
Talk: Construction of GSMs OR E.M. Algorithms |
Hassan |
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Talk: Intro LP/FBA(Could include Construction of GSMs here) |
|
||
Practical 1: (continued) |
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All |
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Wed 16th, AM |
Case studies in biotechnology and metabolic engineering (link needs updating!) |
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Talk: Analysis of GSMs |
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Practical 2: |
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Wed 16th, PM |
Content |
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Content |
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Content |
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