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| ||<style="text-align:center" |3>Tue 15th, PM ||'''Talk:''' Construction of GSMs OR E.M. Algorithms ||[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L4/Slides.pdf|Slides]] ||<style="text-align:center" |1>Hassan || | ||<style="text-align:center" |3>Tue 15th, PM ||'''Talk:''' Algorithms for calcualting Elementary Modes ||[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L4/Slides.pdf|Slides]] ||<style="text-align:center" |1>Hassan || |
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| ||'''Talk:''' Analysis of GSMs ||[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L7/Slides.pdf|Slides]] || || | ||'''Talk:''' Analysis of GSMs - Novel antibiotic targets ||[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L7/Slides.pdf|Slides]] || Hassan|| |
Modelling Workshop, Pune, 2016
Download the Virtualbox image and import it into virtual box (File/Import appliance). There is single user with the id 'scrumpy' with the password 'scrumpy'. 'scrumpy' is also the root password. This image is for pre-workshop testing and may well change!
Follow this link if you wish to install ScrumPy on a Linux computer.
Draft timetable (Subject to Change)
Mornings, 9:30 -12:30 (Monday 10:00 - 12:30); Lunch 12:30 - 14:00; Afternoons, 14:00 - 17:00 (at the latest)
Time |
Activity |
Resources |
Who |
Mon 14th, AM |
Registration and admin |
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Mon 14th, PM |
Talk: Indroductory theory |
Mark |
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Talk: Python, object-orientation and models. |
Mark |
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Practical 0: Checking ScrumPy installation |
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All |
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Tue 15th, AM |
Talk: Structural analysis of small models. |
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Practical 1: Structural analysis of small models |
All |
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Tue 15th, PM |
Talk: Algorithms for calcualting Elementary Modes |
Hassan |
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Talk: Intro LP/FBA(Could include Construction of GSMs here) |
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Practical 1: (continued) |
All |
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Wed 16th, AM |
Case studies in biotechnology and metabolic engineering (link needs updating!) |
David |
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Talk: Analysis of GSMs - Novel antibiotic targets |
Hassan |
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Practical 2: |
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Wed 16th, PM |
Practical 2: (continued) |
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Content |
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Concluding remarks and presentation of certificates |
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