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||<style="text-align:center" |2>Tue 15th, AM ||'''Talk:''' Structural analysis of small models. ||[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L3/Slides.pdf|Slides]] ||<style="text-align:center" |1> || ||<style="text-align:center" |2>Tue 15th, AM ||'''Talk:''' Structural analysis of small models. ||[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L3/Slides.pdf|Slides]] ||<style="text-align:center" |1> David||

Modelling Workshop, Pune, 2016

Download the Virtualbox image and import it into virtual box (File/Import appliance). There is single user with the id 'scrumpy' with the password 'scrumpy'. 'scrumpy' is also the root password. This image is for pre-workshop testing and may well change!

Follow this link if you wish to install ScrumPy on a Linux computer.

Draft timetable (Subject to Change)

Mornings, 9:30 -12:30 (Monday 10:00 - 12:30); Lunch 12:30 - 14:00; Afternoons, 14:00 - 17:00 (at the latest)

Time

Activity

Resources

Who

Mon 14th, AM

Registration and admin

Welcome Talk

Anu(?)

Mon 14th, PM

Talk: Indroductory theory

Slides

Mark

Talk: Python, object-orientation and models.

Slides

Mark

Practical 0: Checking ScrumPy installation

All

Tue 15th, AM

Talk: Structural analysis of small models.

Slides

David

Practical 1: Structural analysis of small models

Instructions

All

Tue 15th, PM

Talk: Algorithms for calculating Elementary Modes

Slides

Hassan

Talk: Linear Programming and Genome Scale Models

Slides

Mark

Practical 1: (continued)

Instructions

All

Wed 16th, AM

Talk: Biotechnological Applications of Metabolic Network Analysis

Slides

David

Talk: Analysis of GSMs - Novel antibiotic targets

Slides

Hassan

Practical 2:

Instructions

Wed 16th, PM

Practical 2: (continued)

Instructions

Talk: Metabolic engineering of Geobaccilus

Slides

Hassan

Concluding remarks and presentation of certificates

None: Meetings/Pune2016 (last edited 2016-03-16 05:20:26 by mark)