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| ||<tablewidth="860px" tableheight="449px">'''Time''' ||'''Activity''' ||'''Resources''' ||'''Who''' || ||<style="text-align:center" |2>Mon 14th, AM ||Registration and admin ||<style="text-align:center" |1> ||<style="text-align:center" |1> || ||Welcome Talk ||<style="text-align:center" |1> ||<style="text-align:center" |1>Anu + Mark || ||<style="text-align:center" |3>Mon 14th, PM ||'''Talk:''' Indroductory theory ||[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L1/Slides.pdf|Slides]] ||<style="text-align:center" |1>Mark || ||'''Talk:''' Python, object-orientation and models. ||<style="text-align:left;" |1>[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L2/Slides.pdf|Slides]] ||<style="text-align:center" |1>Mark || ||'''Practical 0:''' Checking !ScrumPy Installation and Familiarisation ||<style="text-align:center" |1>[[Meetings/Pune2016/P0|Instructions]] ||<style="text-align:center" |1>All || ||<style="text-align:center" |2>Tue 15th, AM ||'''Talk:''' Structural analysis of small models. ||[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L3/Slides.pdf|Slides]] ||<style="text-align:center" |1>David || ||'''Practical 1''': Structural analysis of small models ||<style="text-align:center" |1>[[Meetings/Pune2016/P1|Instructions]] ||<style="text-align:center" |1>All || ||<style="text-align:center" |3>Tue 15th, PM ||'''Talk:''' Algorithms for calculating Elementary Modes ||[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L4/Slides.pdf|Slides]] ||<style="text-align:center" |1>Hassan || ||'''Talk:''' Linear Programming and Genome Scale Models ||<style="text-align:center" |1>[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L5/Slides.pdf|Slides]] ||<style="text-align:center" |1>Mark || ||'''Practical 1''': (continued) ||<style="text-align:center" |1>[[Meetings/Pune2016/P1|Instructions]] ||<style="text-align:center" |1>All || ||<style="text-align:center" |3>Wed 16th, AM ||''' Talk:''' Biotechnological Applications of Metabolic Network Analysis ||[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L6/Slides.pdf|Slides]] ||<style="text-align:center" |1>David || ||'''Talk:''' Analysis of GSMs - Novel antibiotic targets ||[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L7/Slides.pdf|Slides]] ||Hassan || ||'''Practical 2: '''Identifying Novel Antibiotic Targets in Salmonella ||[[Meetings/Pune2016/P2|Instructions]] || || ||<style="text-align:center" |3>Wed 16th, PM ||'''Practical 2''': (continued) ||[[Meetings/Pune2016/P2|Instructions]] ||<style="text-align:center" |1> || ||'''Talk:''' Metabolic engineering of Geobacillus ||[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L8/Slides.pdf|Slides]] ||Hassan || ||Concluding remarks and presentation of certificates || || || |
||<tablewidth="1177px" tableheight="550px"width="73px" style="border-top:1px solid #000000;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0.05cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">'''Day''' ||<width="66px" style="border-top:1px solid #000000;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0.05cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">'''Time''' ||<width="442px" style="border-top:1px solid #000000;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0.05cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">'''Activity''' ||<width="86px" style="border-top:1px solid #000000;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0.05cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">'''Resources''' ||<width="82px" style="border:1px solid #000000;padding:0.05cm">'''Who''' || ||<width="73px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm;text-align:center" |4>Mon 14th, AM ||<width="66px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">11:00 ||<width="442px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">Registration and admin ||<width="86px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm"> ||<width="82px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:1px solid #000000;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0.05cm"> || ||<width="66px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">11:20 ||<width="442px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">Welcome Talk ||<width="86px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm"> ||<width="82px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:1px solid #000000;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0.05cm">Anu + Mark || ||<width="66px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">11:30 ||<width="442px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">'''Talk:''' Introductory theory ||<width="86px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L1/Slides.pdf|Slides]] ||<width="82px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:1px solid #000000;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0.05cm">Mark || ||<width="66px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">12:30 ||<width="442px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">Lunch ||<width="86px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm"> ||<width="82px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:1px solid #000000;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0.05cm">All || ||<width="73px" height="40px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm;text-align:center" |3>Mon 14th, PM ||<width="66px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">14:00 ||<width="442px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">'''Talk:''' Python, object-orientation and models. ||<width="86px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L2/Slides.pdf|Slides]] ||<width="82px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:1px solid #000000;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0.05cm">Mark || ||<width="66px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">15:00 ||<width="442px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">'''Practical 0:''' Checking !ScrumPy Installation and Familiarisation ||<width="86px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">[[http://mudshark.brookes.ac.uk/Meetings/Pune2016/P0|Instructions]] ||<width="82px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:1px solid #000000;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0.05cm">All || ||<width="66px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">17:00 ||<width="442px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">Close ||<width="86px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm"> ||<width="82px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:1px solid #000000;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0.05cm"> || ||<width="73px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm;text-align:center" |3>Tue 15th, AM ||<width="66px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">09:30 ||<width="442px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">'''Talk:''' Structural analysis of small models. ||<width="86px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L3/Slides.pdf|Slides]] ||<width="82px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:1px solid #000000;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0.05cm">David || ||<width="66px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">10:30 ||<width="442px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">'''Practical 1''': Structural analysis of small models ||<width="86px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">[[http://mudshark.brookes.ac.uk/Meetings/Pune2016/P1|Instructions]] ||<width="82px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:1px solid #000000;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0.05cm">All || ||<width="66px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">12:30 ||<width="442px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">Lunch ||<width="86px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm"> ||<width="82px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:1px solid #000000;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0.05cm"> || ||<width="73px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm;text-align:center" |4>Tue 15th, PM ||<width="66px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">14:00 ||<width="442px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">'''Talk:''' Algorithms for calculating Elementary Modes ||<width="86px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L4/Slides.pdf|Slides]] ||<width="82px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:1px solid #000000;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0.05cm">Hassan || ||<width="66px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">15:00 ||<width="442px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">'''Talk:''' Linear Programming and Genome Scale Models ||<width="86px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L5/Slides.pdf|Slides]] ||<width="82px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:1px solid #000000;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0.05cm">Mark || ||<width="66px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">16:00 ||<width="442px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">'''Practical 1''': (continued) ||<width="86px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">[[http://mudshark.brookes.ac.uk/Meetings/Pune2016/P1|Instructions]] ||<width="82px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:1px solid #000000;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0.05cm">All || ||<width="66px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">17:00 ||<width="442px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">Close ||<width="86px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm"> ||<width="82px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:1px solid #000000;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0.05cm"> || ||<width="73px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm;text-align:center" |4>Wed 16th, AM ||<width="66px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">09:30 ||<width="442px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">'''Talk:''' Biotechnological Applications of Metabolic Network Analysis ||<width="86px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L6/Slides.pdf|Slides]] ||<width="82px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:1px solid #000000;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0.05cm">David || ||<width="66px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">10:30 ||<width="442px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">'''Talk:''' Analysis of GSMs - Novel antibiotic targets ||<width="86px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L7/Slides.pdf|Slides]] ||<width="82px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:1px solid #000000;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0.05cm">Hassan || ||<width="66px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">11:30 ||<width="442px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">'''Practical 2: '''Identifying Novel Antibiotic Targets in Salmonella ||<width="86px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">[[http://mudshark.brookes.ac.uk/Meetings/Pune2016/P2|Instructions]] ||<width="82px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:1px solid #000000;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0.05cm"> || ||<width="66px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">12:30 ||<width="442px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">Lunch ||<width="86px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm"> ||<width="82px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:1px solid #000000;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0.05cm"> || ||<width="73px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm;text-align:center" |4>Wed 16th, PM ||<width="66px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">14:00 ||<width="442px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">'''Practical 2''': (continued) ||<width="86px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">[[http://mudshark.brookes.ac.uk/Meetings/Pune2016/P2|Instructions]] ||<width="82px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:1px solid #000000;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0.05cm"> || ||<width="66px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">15:30 ||<width="442px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">'''Talk:''' Metabolic engineering of Geobacillus ||<width="86px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">[[http://mudsharkstatic.brookes.ac.uk/Pune2016/L8/Slides.pdf|Slides]] ||<width="82px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:1px solid #000000;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0.05cm">Hassan || ||<width="66px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">16:30 ||<width="442px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">Concluding remarks and presentation of certificates ||<width="86px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm"> ||<width="82px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:1px solid #000000;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0.05cm"> || ||<width="66px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">17:00 ||<width="442px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm">'''Close''' ||<width="86px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:none;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0cm"> ||<width="82px" style="border-top:none;border-bottom:1px solid #000000;border-left:1px solid #000000;border-right:1px solid #000000;padding-top:0cm;padding-bottom:0.05cm;padding-left:0.05cm;padding-right:0.05cm"> || |
Modelling Workshop, Pune, 2016
Download the Virtualbox image and import it into virtual box (File/Import appliance). There is single user with the id 'scrumpy' with the password 'scrumpy'. 'scrumpy' is also the root password. This image is for pre-workshop testing and may well change!
Follow this link if you wish to install ScrumPy on a Linux computer.
Timetable (Subject to Change)
Mornings, 9:30 -12:30 (Monday 11:00 - 12:30); Lunch 12:30 - 14:00; Afternoons, 14:00 - 17:00 (at the latest)
Day |
Time |
Activity |
Resources |
Who |
Mon 14th, AM |
11:00 |
Registration and admin |
|
|
11:20 |
Welcome Talk |
|
Anu + Mark |
|
11:30 |
Talk: Introductory theory |
Mark |
||
12:30 |
Lunch |
|
All |
|
Mon 14th, PM |
14:00 |
Talk: Python, object-orientation and models. |
Mark |
|
15:00 |
Practical 0: Checking ScrumPy Installation and Familiarisation |
All |
||
17:00 |
Close |
|
|
|
Tue 15th, AM |
09:30 |
Talk: Structural analysis of small models. |
David |
|
10:30 |
Practical 1: Structural analysis of small models |
All |
||
12:30 |
Lunch |
|
|
|
Tue 15th, PM |
14:00 |
Talk: Algorithms for calculating Elementary Modes |
Hassan |
|
15:00 |
Talk: Linear Programming and Genome Scale Models |
Mark |
||
16:00 |
Practical 1: (continued) |
All |
||
17:00 |
Close |
|
|
|
Wed 16th, AM |
09:30 |
Talk: Biotechnological Applications of Metabolic Network Analysis |
David |
|
10:30 |
Talk: Analysis of GSMs - Novel antibiotic targets |
Hassan |
||
11:30 |
Practical 2: Identifying Novel Antibiotic Targets in Salmonella |
|
||
12:30 |
Lunch |
|
|
|
Wed 16th, PM |
14:00 |
Practical 2: (continued) |
|
|
15:30 |
Talk: Metabolic engineering of Geobacillus |
Hassan |
||
16:30 |
Concluding remarks and presentation of certificates |
|
|
|
17:00 |
Close |
|
|