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= Model Repository =
=== (Under construction) ===
 . Our models are generally developed and analysed using [[./ScrumPy|ScrumPy]], and the ScrumPy source files are human--readable text files (*.spy). (Unless otherwise stated, these files will have Linux/MacOS line ends, and Windows users should either convert the line ends or open them with a text editor that copes with the difference.) SBML forms are provided for compatibility.

== Structural Models ==
 . These model files contain the metabolic network structure only. Constraints (including biomass composition) and objectives for analysis by linear programming / FBA are in associated Python modules to be used in conjunction with !ScrumPy. Contact us for further details.
  * [[Models/Geobac|Geobacillus]] thermoglucosidasius
  * [[Models/EcoliCCM|E coli central carbon metabolism with alkane synthesis]]
 .

== Kinetic Models ==		 == Coming soon ... ==

Coming soon ...

None: Models (last edited 2024-12-06 15:13:06 by mark)