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| = ScrumPy Documentation = |
## page was renamed from Software/ScrumPy/Doc = ScrumPy Manual = |
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=== Why Python ? === 'cause it's great. === What ScrumPy Is === === What ScrumPy Isn't === === Quick examples === == ScrumPy model format == |
=== Metabolic Modelling === === Design Philosophy === === Python === == ScrumPy Model Description Language == == Analysis of Models With ScrumPy == === The ScrumPy Modelling Environment === === Anatomy of a ScrumPy Model === === Kinetic Modelling === === Structural Modelling === === Linear Programming === == Secondary Analysis of Model Results == === Data sets === === Fitting and Optimisation === == Automatic Model Building == |
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ScrumPy Manual
1. Introduction
1.1. Metabolic Modelling
1.2. Design Philosophy
1.3. Python
2. ScrumPy Model Description Language
3. Analysis of Models With ScrumPy
3.1. The ScrumPy Modelling Environment
3.2. Anatomy of a ScrumPy Model
3.3. Kinetic Modelling
3.4. Structural Modelling
3.5. Linear Programming
4. Secondary Analysis of Model Results
4.1. Data sets
4.2. Fitting and Optimisation
5. Automatic Model Building
6. Structural Analysis of Models
7. Kinetic Analysis of Models