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=== Python ===
=== Python ===
==== Knowing syntax vs programming ====
==== Inbuilt types and classes ====
==== Classes and sub-classes ====
==== Repetiton and Descissions ====
==== Modules and Packages ====
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=== Overview ===
=== Identifiers ===
=== Reactions ===
=== Directives ===
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=== The Matrix Class ===
Fully described in utility section - enough here to understand SMs, datasets and monitors.
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== Structural Analysis of Models ==

== Kinetic Analysis of Models ==
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== The Utility Package ==
=== Dynamic Matrices ===

ScrumPy Manual

Introduction

Metabolic Modelling

Design Philosophy

Python

Knowing syntax vs programming

Inbuilt types and classes

Classes and sub-classes

Repetiton and Descissions

Modules and Packages

ScrumPy Model Description Language

Overview

Identifiers

Reactions

Directives

Analysis of Models With ScrumPy

The ScrumPy Modelling Environment

The Matrix Class

Fully described in utility section - enough here to understand SMs, datasets and monitors.

Anatomy of a ScrumPy Model

Kinetic Modelling

Structural Modelling

Linear Programming

Secondary Analysis of Model Results

Data sets

Fitting and Optimisation

Automatic Model Building

Bioinformatics Functions

The Utility Package

Dynamic Matrices

None: ScrumPy/Doc (last edited 2013-11-06 14:23:12 by david)